The following pages and posts are tagged with

TitleTypeExcerpt
Practical genomic epidemiology Page This tutorial presents an outbreak scenario that starts with a small number of initial cases with no known infectious agent. We will initially identify the p...
Revealing the evolutionary dynamics of influenza Page This tutorial provides a step-by-step explanation on how to reconstruct the evolutionary dynamics of influenza based on a set of virus sequences which have b...
Model Selection and Testing Page This tutorial continues the analysis of yellow fever virus (YFV) from the Estimating rates and dates from time-stamped sequences tutorial. Here we use margin...
Estimating rates and dates from time-stamped sequences Page This tutorial provides a step-by-step tutorial for analyzing a set of virus sequences which have been isolated at different points in time (heterochronous da...
Phylodynamic inference of respiratory viruses Page This tutorial provides a step-by-step explanation on how to reconstruct the evolutionary dynamics of respiratory viruses based on sets of virus sequences tha...